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ISIS-2177: further remove uses of ObjectAdapter

also cleanup java-doc

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    ./query/PersistenceQueryFindAllInstances.java
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ISIS-2177: remove ObjectAdapter.isRepresentingPersistent()

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    ./adapter/ObjectAdapterForBean.java
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ISIS-2177: remove ObjectAdapter.isTransient()

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ISIS-2177: some fixes

re-implement code for proper object deleted detection

prevent NPE on ill-formed request

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ISIS-2175: remove Oid.getVersion()

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ISIS-2175: remove Oid.getVersion()

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ISIS-2175: Remove the 'Version' in OIDs

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ISIS-2175: Remove the 'Version' in OIDs

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ISIS-2158: have PersistenceSessionFactory managed by Spring

- allows to remove service loader 'IsisJsoRuntimePlugin'

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ISIS-2158: further regarding terminology

- also consolidate some of the type categorization logic

- a ManagedBeanAdapter is always of BeanSort = MANAGED_BEAN, so field

removed

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ISIS-2158: some renaming after clarifying terminology

- ManagedBean <=> injectable

- ManagedObject <=> introspectable

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ISIS-2158: non-invasive preparations for ISIS-1998

adding tests first (test driven development) before actually modifying

the programming model ...

1. facet processing tests

2. smoketests to test whether the generated meta-model is as expected

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ISIS-2086: deletes Slf4jLogger

since unused; we have now moved over to log4j2.

ISIS-2086: rework (unused) 'isis.persistor.enforceSafeSemantics' as type-safe config

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batch update source format:

- Add missing '@Override' annotations

- Correct indentation

- Add file header (JAutodoc)

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batch update source format: organize imports and reorder

0=java

1=javax

2=com

3=org

4=org.apache.isis

5=org.isisaddons

6=org.incode

7=#

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ISIS-2125 major (breaking) commit: new transaction paradigma

- opening an isis session does no longer open a transactional context

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ISIS-2125 batch-update license headers for *.java files

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    ./adapter/ObjectAdapterForBean.java
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ISIS-2154 removes ObjectAdapter.checkLock(Version version)

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ISIS-2154 removes references to the ConcurrencyChecking enum

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ISIS-2126 removing '/core/' and '*.core.*' in names where reasonable

- removed from all 'automaticModuleName' and 'artifactId'

- so we basically renamed all core artifacts!

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ISIS-2126 moving jdo exception recognizers 'metamodel' -> 'jdo-commons'

- also aligning pkg names in modules 'security' and 'jdo-*'

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ISIS-2126 consolidating 'metamodel' o.a.i.c.common packages and classes

- pkg names in module 'metamodel' are now fully aligned

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    ./query/PersistenceQueryFindAllInstances.java
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    ./query/PersistenceQueryFindUsingApplibQueryDefault.java
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ISIS-2126 aligning most pkg names for modules 'runtime*'

- o.a.i.core.runtime.* -> o.a.i.runtime.*

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    ./FixturesInstalledFlag.java
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    ./FixturesInstalledState.java
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    ./FixturesInstalledStateHolder.java
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    ./IsisJdoRuntimePlugin.java
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    ./NotPersistableException.java
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    ./PersistenceConstants.java
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    ./UnsupportedFindException.java
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    ./adapter/ObjectAdapterForBean.java
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    ./adapter/PojoAdapter.java
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    ./objectstore/Slf4jLogger.java
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    ./objectstore/transaction/CreateObjectCommand.java
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    ./objectstore/transaction/DestroyObjectCommand.java
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    ./objectstore/transaction/PersistenceCommand.java
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    ./objectstore/transaction/PersistenceCommandAbstract.java
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    ./objectstore/transaction/PersistenceCommandContext.java
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aligning package names with maven groupId/artifactId for core/runtime

git-svn-id: https://svn.apache.org/repos/asf/incubator/isis/trunk@1035640 13f79535-47bb-0310-9956-ffa450edef68

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    ./PersistenceMechanismInstaller.java
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    ./PersistenceMechanismInstallerAbstract.java
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    ./PersistenceSessionAbstract.java
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    ./PersistenceSessionAdaptedServiceManager.java
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    ./PersistenceSessionContainer.java
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    ./PersistenceSessionFactoryDelegate.java
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    ./PersistenceSessionFactoryDelegating.java
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aligning package names with maven groupId/artifactId for core/runtime

git-svn-id: https://svn.apache.org/repos/asf/incubator/isis/trunk@1035630 13f79535-47bb-0310-9956-ffa450edef68

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    ./PersistenceMechanismInstallerAbstract.java
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    ./PersistenceSessionTransactionManagement.java
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    ./internal/RuntimeContextFromSession.java
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    ./objectstore/ObjectStorePersistenceMechanismInstallerAbstract.java
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    ./objectstore/ObjectStoreTransactionManagement.java
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    ./objectstore/PersistenceSessionObjectStore.java
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aligning package names with maven groupId/artifactId for core/runtime

git-svn-id: https://svn.apache.org/repos/asf/incubator/isis/trunk@1035613 13f79535-47bb-0310-9956-ffa450edef68

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    ./adapterfactory/pojo/PojoAdapter.java
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    ./adaptermanager/ObjectToAdapterTransformer.java
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    ./container/DomainObjectContainerObjectChanged.java
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    ./container/DomainObjectContainerResolve.java
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    ./internal/RuntimeContextFromSession.java
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    ./objectfactory/ObjectFactoryAbstract.java
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    ./objectstore/PersistenceSessionObjectStore.java
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    ./services/config/ServicesFromConfiguration.java
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renaming packages to be consistent with Maven archetypes: org.apache.isis.metamodel -> org.apache.isis.core.metamodel (2 of 2)

git-svn-id: https://svn.apache.org/repos/asf/incubator/isis/trunk@1032561 13f79535-47bb-0310-9956-ffa450edef68

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    ./PersistenceMechanismInstallerAbstract.java
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    ./PersistenceSessionFactoryDelegating.java
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    ./adapterfactory/pojo/PojoAdapter.java
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    ./adaptermanager/AdapterManagerDefault.java
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    ./container/DomainObjectContainerObjectChanged.java
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    ./container/DomainObjectContainerResolve.java
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    ./internal/RuntimeContextFromSession.java
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renaming packages to be consistent with Maven archetypes: org.apache.isis.metamodel -> org.apache.isis.core.metamodel (1 of 2, I hope)

git-svn-id: https://svn.apache.org/repos/asf/incubator/isis/trunk@1032543 13f79535-47bb-0310-9956-ffa450edef68

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    ./PersistenceMechanismInstallerAbstract.java
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    ./PersistenceSessionAdaptedServiceManager.java
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    ./PersistenceSessionForceReloader.java
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    ./PersistenceSessionTransactionManagement.java
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    ./adapterfactory/AdapterFactoryAbstract.java
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    ./adapterfactory/pojo/PojoAdapter.java
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renaming packages to be consistent with Maven archetypes: org.apache.isis.commons -> org.apache.isis.core.commons

git-svn-id: https://svn.apache.org/repos/asf/incubator/isis/trunk@1032505 13f79535-47bb-0310-9956-ffa450edef68

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    ./PersistenceMechanismInstallerAbstract.java
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    ./PersistenceSessionFactoryDelegating.java
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    ./adapterfactory/AdapterFactoryInstaller.java
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    ./adapterfactory/pojo/PojoAdapter.java
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