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Change folder structure for Java repackage

Change only the folders, not the files, for our package name change.

This will break the build, and needs to be followed by a change to

the package name in all of the source files. However performing

the folder move and file change in two steps lets Git understand

that the files are the same, and lets us track revisions across

those files.

Change-Id: I08aff75e25ac7c6298c32cf3402febbc4a318c2a

Reviewed-on: https://asterix-gerrit.ics.uci.edu/307

Tested-by: Jenkins <jenkins@fulliautomatix.ics.uci.edu>

Reviewed-by: Chris Hillery <ceej@lambda.nu>

    • -73
    • +0
    ./application/ApplicationContext.java
    • -23
    • +0
    ./application/ApplicationStatus.java
    • -159
    • +0
    ./controllers/NodeRegistration.java
    • -106
    • +0
    ./deployment/ClassLoaderJobSerializerDeserializer.java
    • -225
    • +0
    ./deployment/DeploymentUtils.java
  1. … 3879 more files in changeset.
Add Apache RAT License Auditor plugin, and fix missing licenses

Change-Id: I39d92ec6654c73b4e6b8ba76dd66770bb60c7b79

Reviewed-on: https://asterix-gerrit.ics.uci.edu/260

Tested-by: Jenkins <jenkins@fulliautomatix.ics.uci.edu>

Reviewed-by: Chris Hillery <ceej@lambda.nu>

Reviewed-by: Till Westmann <tillw@apache.org>

    • -0
    • +14
    ./shutdown/IShutdownStatusConditionVariable.java
  1. … 32 more files in changeset.
Add ability to configure network ports for NCs and CC.

This includes the ability to specify different "public" ports, for situations

when a node is behind a NAT firewall.

Also eliminate IP check for data and dataset network addresses, which

should allow DNS names to be used as well.

Some internal cleanup regarding handling network addresses.

Change-Id: I9947fe3cec59daef3458cdc14d33c9353449da27

Reviewed-on: http://fulliautomatix.ics.uci.edu:8443/204

Reviewed-by: Ian Maxon <imaxon@uci.edu>

Tested-by: Ian Maxon <imaxon@uci.edu>

  1. … 24 more files in changeset.
Add Shutdown via API to Hyracks

This change adds a method to HyracksConnection called stopCluster().

When the CC recieves a message from this, it asks all NC tasks to close

and acknowledge that they have recieved the message and are closing.

If all NCs have closed, or a 10 second timeout elapses, the CC then

exits with a 0 return code if all NCs closed, or a 1 if some did

not acknowledge the shutdown request.

Change-Id: Iaf3d395dc7964e114d4929830f40063f58e0d5da

Reviewed-on: http://fulliautomatix.ics.uci.edu:8443/76

Tested-by: Jenkins <jenkins@fulliautomatix.ics.uci.edu>

Reviewed-by: Vinayak Borkar <vinayakb@gmail.com>

    • -0
    • +5
    ./ipc/ClusterControllerRemoteProxy.java
    • -0
    • +10
    ./shutdown/IShutdownStatusConditionVariable.java
    • -0
    • +58
    ./shutdown/ShutdownRun.java
  1. … 17 more files in changeset.
Several major changes in hyracks: -- reduced CC/NC communications for reporting partition request and availability; partition request/availability are only reported for the case of send-side materialized (without pipelining) policies in case of task re-attempt. -- changed buffer cache to dynamically allocate memory based on needs instead of pre-allocating -- changed each network channel to lazily allocate memory based on needs, and changed materialized connectors to lazily allocate files based on needs -- changed several major CCNCCFunctions to use non-java serde -- added a sort-based group-by operator which pushes group-by aggregations into an external sort -- make external sort a stable sort

1,3,and 4 is to reduce the job overhead.

2 is to reduce the unecessary NC resource consumptions such as memory and files.

5 and 6 are improvements to runtime operators.

One change in algebricks:

-- implemented a rule to push group-by aggregation into sort, i.e., using the sort-based gby operator

Several important changes in pregelix:

-- remove static states in vertex

-- direct check halt bit without deserialization

-- optimize the sort algorithm by packing yet-another 2-byte normalized key into the tPointers array

Change-Id: Id696f9a9f1647b4a025b8b33d20b3a89127c60d6

Reviewed-on: http://fulliautomatix.ics.uci.edu:8443/35

Tested-by: Jenkins <jenkins@fulliautomatix.ics.uci.edu>

Reviewed-by: Till Westmann <westmann@gmail.com>

    • -2
    • +28
    ./job/profiling/om/AbstractProfile.java
    • -2
    • +40
    ./job/profiling/om/JobletProfile.java
    • -5
    • +35
    ./job/profiling/om/PartitionProfile.java
    • -2
    • +40
    ./job/profiling/om/TaskProfile.java
  1. … 266 more files in changeset.
reduced communication during result distribution - when reporting the location of results, the NCs also report if the result partition is empty - the client does not try to read empty partitions better toString() for subclasses of AbstractWork

Change-Id: Ia39f657e689ea305d49d55bd27c9a512e1ff970f

Reviewed-on: http://fulliautomatix.ics.uci.edu:8443/39

Tested-by: Jenkins <jenkins@fulliautomatix.ics.uci.edu>

Reviewed-by: Yingyi Bu <buyingyi@gmail.com>

    • -2
    • +2
    ./ipc/ClusterControllerRemoteProxy.java
  1. … 20 more files in changeset.
start WorkQueue at the end of CC startup - should avoid issues like https://code.google.com/p/asterixdb/issues/detail?id=758

Change-Id: I209217ac1e923e7d2a22b6944c873236c62ef13b

Reviewed-on: http://fulliautomatix.ics.uci.edu:8443/38

Reviewed-by: Zachary Heilbron <zheilbron@gmail.com>

Tested-by: Jenkins <jenkins@fulliautomatix.ics.uci.edu>

Reviewed-by: Raman Grover <ramang@uci.edu>

  1. … 1 more file in changeset.
formatting

  1. … 4 more files in changeset.
restoring default values for heartbeat_period and max_heartbeat_elapsed, temporarily changed for fault tolerance experiments

1. add deployment retry 2. support plan switch

    • -27
    • +35
    ./deployment/DeploymentUtils.java
  1. … 4 more files in changeset.
add I/O counter

  1. … 7 more files in changeset.
added ability to trigger an application state dump through the rest api

    • -0
    • +7
    ./ipc/ClusterControllerRemoteProxy.java
  1. … 17 more files in changeset.
fix file write race condition

    • -1
    • +5
    ./deployment/ClassLoaderJobSerializerDeserializer.java
  1. … 22 more files in changeset.
fix fault-tolerance and error reporting to handle disk failures

    • -0
    • +60
    ./utils/ExceptionUtils.java
  1. … 31 more files in changeset.
1. simply activity cluster planner for all-producers-to-all-consumers kind of connectors; 2. lower the NC task threads' priority

  1. … 7 more files in changeset.
shut down ResultStateSweeper when it's interrupted

revert heart beat configs to defaults

Instead of adding stop commands to the running thread, this commit changes the thread to be a daemon thread.

Instead of adding stop commands to the running thread, this patch changes the thread to be a daemon thread.

  1. … 4 more files in changeset.
Add support for stopping the ResultStateSweeper thread in to the classes that create it.

  1. … 4 more files in changeset.
temporarily altered defaults for testing

  1. … 1 more file in changeset.
merge from master

  1. … 12 more files in changeset.
checkpoint

  1. … 5 more files in changeset.
Merge branch 'master' of https://code.google.com/p/hyracks

  1. … 24 more files in changeset.
add/update license headers

    • -1
    • +1
    ./ipc/ClusterControllerRemoteProxy.java
  1. … 2273 more files in changeset.
Add command line parameters to command line mappers.

Refactor out the result state sweeper code.

    • -0
    • +79
    ./dataset/ResultStateSweeper.java
  1. … 7 more files in changeset.
Add new configuration parameters for NC for new result distribution policy based on time.

Add new configuration parameters on CC side for new result distribution cleanup policy based on time.

Orchestrated the use of executors and thread factory and added buffer cache core dump.

    • -0
    • +16
    ./application/ApplicationContext.java
  1. … 18 more files in changeset.